MARA results: cerebellum, embryo E18, biol

Sample name: cerebellum, embryo E18, biol_rep2 (E18R2)

Sorted Z-values histogram for the sample cerebellum, embryo E18, biol_rep2 (E18R2)

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
REST.p3	6.318	Rest
UGUGCUU	4.285
ESRRA.p2	3.877	Esrra
ZFP161.p2	3.593	Zfp161
UAUUGCU	3.352
RFX1..5_RFXANK_RFXAP.p2	3.191	Rfx1 Rfxap Rfx5 Rfxank Rfx4 Rfx3 Rfx2
AHR_ARNT_ARNT2.p2	2.856	Arnt Ahr Arnt2
ATF2.p2	2.685	Atf2
MAFB.p2	2.657	Mafb
MYFfamily.p2	2.646	Myod1 Myf6 Myf5 Myog
ZEB1.p2	2.402	Zeb1
SPZ1.p2	2.383	Spz1
NR5A1,2.p2	2.382	Nr5a1 Nr5a2
EWSR1-FLI1.p2	2.347	Fli1 Ewsr1
GGCAGUG	2.296
MTF1.p2	2.290	Mtf1
DBP.p2	2.277	Dbp
ZNF423.p2	2.181	Zfp423
LMO2.p2	2.040	Lmo2
KLF12.p2	2.024	Klf12
CAGCAGG	1.968
NHLH1,2.p2	1.950	Nhlh1 Nhlh2
EGR1..3.p2	1.943	Egr3 Egr1 Egr2
PRRX1,2.p2	1.940	Prrx2 Prrx1
KLF4.p3	1.926	Klf4
SNAI1..3.p2	1.862	Snai2 Snai1 Snai3
GLI1..3.p2	1.842	Gli1 Gli2 Gli3
HIC1.p2	1.813	Hic1
HOX{A6,A7,B6,B7}.p2	1.811	Hoxb6 Hoxa7 Hoxb7 Hoxa6
RREB1.p2	1.702	Rreb1
JUN.p2	1.653	Jun Jund Junb
GAUUGUC	1.565
AUUGCAC	1.543
TFAP4.p2	1.533	Tcfap4
ZNF148.p2	1.491	Zfp148
MYOD1.p2	1.474	Myod1
CRX.p2	1.464	Crx
SMAD1..7,9.p2	1.397	Smad5 Smad1 Smad3 Smad4 Smad2 Smad6 Smad7 Smad9
GGAAGAC	1.378
NFIX.p2	1.319	Nfix
TBX4,5.p2	1.225	Tbx5 Tbx4
EVI1.p2	1.216	Mecom
ZIC1..3.p2	1.210	Zic1 Zic2 Zic3
RORA.p2	1.204	Rora
NFE2L1.p2	1.196	Nfe2l1
TFAP2{A,C}.p2	1.195	Tcfap2c Tcfap2a
SRY.p2	1.190	Sry
ZBTB6.p2	1.187	Zbtb6
GCUGGUG	1.148
SP1.p2	1.124	Sp1
GUGCAAA	1.091
HOX{A4,D4}.p2	1.086	Hoxa4 Hoxd4
NFE2L2.p2	1.049	Nfe2l2
FOX{F1,F2,J1}.p2	1.047	Foxf2 Foxj1 Foxf1a
HMX1.p2	1.033	Hmx1
UUGGCAC	1.030
ETS1,2.p2	0.963	Ets2 Ets1
IKZF1.p2	0.949	Ikzf1
AAAGUGC	0.946
GAGAACU	0.901
T.p2	0.900	T
NKX3-2.p2	0.890	Nkx3-2
AGCACCA	0.879
MAZ.p2	0.857	Maz
AGCAGCA	0.825
POU5F1.p2	0.800	Pou5f1
EN1,2.p2	0.797	En1 En2
GGCUCAG	0.759
ATF5_CREB3.p2	0.749	Atf5 Creb3
UGCAUUG	0.733
CUCCCAA	0.729
NFE2.p2	0.727	Nfe2
bHLH_family.p2	0.711	Arntl Mitf Mxi1 Tcfe3 Clock Olig2 Mxd4 Hey2 Hey1 Heyl Mlxipl Hes6 Mxd3 Arntl2 Id1 Mnt Olig1 Npas2
SOX5.p2	0.700	Sox5
PAX4.p2	0.695	Pax4
TFCP2.p2	0.691	Tcfcp2
NKX2-1,4.p2	0.686	Nkx2-1 Nkx2-4
AUGGCUU	0.684
GAGAUGA	0.660
FOXQ1.p2	0.650	Foxq1
TFEB.p2	0.629	Tcfeb
AAGGUGC	0.611
EOMES.p2	0.607	Eomes
POU3F1..4.p2	0.594	Pou3f1 Pou3f3 Pou3f2 Pou3f4
FOXD3.p2	0.566	Foxd3
ONECUT1,2.p2	0.559	Onecut2 Onecut1
RXRA_VDR{dimer}.p2	0.556	Vdr	$logo of RXRA_VDR{dimer}.p2$
NFATC1..3.p2	0.555	Nfatc3 Nfatc2 Nfatc1
EBF1.p2	0.537	Ebf1
GTF2A1,2.p2	0.533	Gtf2a1 Gtf2a2
AGGUAGU	0.524
GGAAUGU	0.521
AACACUG	0.520
LEF1_TCF7_TCF7L1,2.p2	0.477	Tcf7 Tcf7l2 Lef1 Tcf7l1
ARID5B.p2	0.459	Arid5b
RXR{A,B,G}.p2	0.450	Rxra Rxrb Rxrg
CCAGCAU	0.449
HOXA9_MEIS1.p2	0.438	Meis1 Hoxa9
RXRG_dimer.p3	0.437	Nr1h2 Rxra Pparg Ppara Rxrb Rxrg
UAAGACG	0.432
NANOG.p2	0.424	Nanog
AIRE.p2	0.419	Aire
ESR1.p2	0.396	Esr1
AGUGCAA	0.389
TAL1_TCF{3,4,12}.p2	0.387	Tcf3 Tcf4 Tal1 Tcf12	$logo of TAL1_TCF{3,4,12}.p2$
GAUCAGA	0.377
FOXL1.p2	0.372	Foxl1
CGUGUCU	0.368
ACAGUAC	0.362
MZF1.p2	0.341	Mzf1
VSX1,2.p2	0.337	Vsx2 Vsx1
GCUACAU	0.303
CUX2.p2	0.293	Cux2
AUGACAC	0.291
HOX{A5,B5}.p2	0.288	Hoxb5 Hoxa5
HAND1,2.p2	0.259	Hand1 Hand2
POU1F1.p2	0.256	Pou1f1
CTCF.p2	0.252	Ctcf
AACGGAA	0.238
CUACAGU	0.231
POU6F1.p2	0.217	Pou6f1
HES1.p2	0.213	Hes1
UAAUGCU	0.211
AGCUGCC	0.205
GFI1B.p2	0.195	Gfi1b
ACCCUGU	0.186
GAUAUGU	0.182
PAX2.p2	0.167	Pax2
TP53.p2	0.152	Trp53
UGCAUAG	0.146
NKX2-2,8.p2	0.142	Nkx2-2 Nkx2-9
BACH2.p2	0.140	Bach2
GGAGUGU	0.133
ACUGGCC	0.120
ACAUUCA	0.119
AAUCUCU	0.106
UGUGCGU	0.094
CGUACCG	0.083
TFAP2B.p2	0.063	Tcfap2b
FEV.p2	0.061	Fev
ZNF143.p2	0.050	Zfp143
NKX3-1.p2	0.050	Nkx3-1
AR.p2	0.050	Ar
GATA1..3.p2	0.031	Gata1 Gata2 Gata3
GTF2I.p2	0.031	Gtf2i
TGIF1.p2	0.023	Tgif1
PDX1.p2	0.023	Pdx1
GGACGGA	0.019
UGACCUA	0.011
ACCCGUA	0.007
MSX1,2.p2	0.003	Msx1 Msx2
PAX3,7.p2	0.002	Pax7 Pax3
UUGGCAA	-0.004
PAX8.p2	-0.008	Pax8
AACCUGG	-0.013
UAAGACU	-0.028
UCACAUU	-0.045
ATF6.p2	-0.057	Atf6
AAUCUCA	-0.059
LHX3,4.p2	-0.066	Lhx3 Lhx4
PAX6.p2	-0.069	Pax6
ALX1.p2	-0.087	Alx1
AACCGUU	-0.101
UGAAAUG	-0.105
NR6A1.p2	-0.109	Nr6a1
UCCCUUU	-0.111
UUGGUCC	-0.117
FOX{I1,J2}.p2	-0.119	Foxi1 Foxj2
PAX5.p2	-0.124	Pax5
ACUGCAU	-0.133
GUAAACA	-0.157
XBP1.p3	-0.170	Xbp1
UUUUUGC	-0.181
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.186	Fos Junb Fosl1 Jund Fosb	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
SREBF1,2.p2	-0.190	Srebf1 Srebf2
EP300.p2	-0.190	Ep300
TCF4_dimer.p2	-0.205	Tcf4
GZF1.p2	-0.205	Gzf1
GCAGCAU	-0.218
CAGUGCA	-0.227
UUGUUCG	-0.250
GGCAAGA	-0.253
AGUGGUU	-0.255
ZNF238.p2	-0.298	Zfp238
ZBTB16.p2	-0.302	Zbtb16
CCUUCAU	-0.307
STAT1,3.p3	-0.309	Stat1 Stat3
HIF1A.p2	-0.325	Hif1a
AACAGUC	-0.362
AUGGCAC	-0.366
SPIB.p2	-0.369	Spib
UCACAGU	-0.376
AAUACUG	-0.383
AAUGCCC	-0.394
HMGA1,2.p2	-0.395	Hmga1 Hmga2
STAT5{A,B}.p2	-0.399	Stat5b Stat5a
NKX6-1,2.p2	-0.445	Nkx6-1 Nkx6-2
UCAAGUA	-0.461
FOX{C1,C2}.p2	-0.487	Foxc1 Foxc2
PPARG.p2	-0.488	Pparg
FOXP3.p2	-0.496	Foxp3
AGCAGCG	-0.509
DMAP1_NCOR{1,2}_SMARC.p2	-0.516	Smarca1 Smarcc2 Smarca5 Ncor1 Ncor2 Dmap1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GUCAGUU	-0.557
PBX1.p2	-0.584	Pbx1
CDC5L.p2	-0.601	Cdc5l
FOXN1.p2	-0.623	Foxn1
IRF1,2,7.p3	-0.628	Irf1 Irf2 Irf7
AAGUGCU	-0.661
CEBPA,B_DDIT3.p2	-0.666	Ddit3 Cebpa Cebpb
NRF1.p2	-0.673	Nrf1
FOXO1,3,4.p2	-0.682	Foxo1 Foxo4 Foxo3
NANOG{mouse}.p2	-0.695	Nanog
ACAGUAU	-0.702
GUAGUGU	-0.746
CCAGUGU	-0.751
CDX1,2,4.p2	-0.770	Cdx1 Cdx2 Cdx4
GUAACAG	-0.792
CACAGUG	-0.823
FOSL2.p2	-0.889	Fosl2
BPTF.p2	-0.902	Bptf
GAGGUAG	-0.950
UCCAGUU	-0.958
RBPJ.p2	-1.000	Rbpj
MYBL2.p2	-1.025	Mybl2
AGCUUAU	-1.033
HLF.p2	-1.045	Hlf
MEF2{A,B,C,D}.p2	-1.088	Mef2a Mef2c Mef2d Mef2b
HNF1A.p2	-1.095	Hnf1a
SPI1.p2	-1.109	Sfpi1
SRF.p3	-1.119	Srf
ADNP_IRX_SIX_ZHX.p2	-1.160	Six5 Zhx1 Irx4 Adnp Zhx3 Zhx2 Irx5 Six2
STAT2,4,6.p2	-1.166	Stat2 Stat4 Stat6
NR3C1.p2	-1.178	Nr3c1
PATZ1.p2	-1.185	Patz1
ZNF384.p2	-1.189	Zfp384
NKX2-3_NKX2-5.p2	-1.194	Nkx2-5 Nkx2-3
TLX1..3_NFIC{dimer}.p2	-1.231	Tlx1 Tlx3	$logo of TLX1..3_NFIC{dimer}.p2$
TLX2.p2	-1.259	Tlx2
PITX1..3.p2	-1.266	Pitx2 Pitx3 Pitx1
MYB.p2	-1.323	Myb
NFKB1_REL_RELA.p2	-1.366	Rela Rel Nfkb1
SOX17.p2	-1.380	Sox17
PRDM1.p3	-1.436	Prdm1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.456	Arnt Max Myc Usf1 Bhlhe40 Arnt2
FOX{D1,D2}.p2	-1.501	Foxd2 Foxd1
TFDP1.p2	-1.590	Tfdp1
HBP1_HMGB_SSRP1_UBTF.p2	-1.609	Hmgb2 Hmgb3 Ssrp1 Ubtf Hbp1
IKZF2.p2	-1.658	Ikzf2
POU5F1_SOX2{dimer}.p2	-1.713	Pou5f1 Sox2	$logo of POU5F1_SOX2{dimer}.p2$
CUUUGGU	-1.767
HNF4A_NR2F1,2.p2	-1.781	Nr2f1 Nr2f2 Hnf4a
NFIL3.p2	-1.785	Nfil3
NFY{A,B,C}.p2	-1.809	Nfyc Nfyb Nfya
RUNX1..3.p2	-1.832	Runx1 Runx3 Runx2
HSF1,2.p2	-1.872	Hsf1 Hsf2
POU2F1..3.p2	-1.961	Pou2f2 Pou2f1 Pou2f3
SOX{8,9,10}.p2	-1.999	Sox9 Sox8 Sox10
EHF.p2	-2.006	Ehf
NR1H4.p2	-2.007	Nr1h4
CREB1.p2	-2.026	Creb1
TBP.p2	-2.310	Tbp
CCCUGAG	-2.450
SOX2.p2	-2.525	Sox2
GFI1.p2	-2.649	Gfi1
GATA6.p2	-2.656	Gata6
E2F1..5.p2	-2.796	E2f4 E2f5 E2f2 E2f1 E2f3
FOXA2.p3	-2.817	Foxa2
ATF4.p2	-2.964	Atf4
YY1.p2	-3.094	Yy1
ELK1,4_GABP{A,B1}.p3	-3.303	Gabpa Gabpb1 Elk4 Elk1	$logo of ELK1,4_GABP{A,B1}.p3$
AAGGCAC	-3.482
ELF1,2,4.p2	-3.806	Elf2 Elf1 Elf4
TEAD1.p2	-4.605	Tead1 Tead2 Tead3 Tead4

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Sample name: cerebellum, embryo E18, biol_rep2 (E18R2)

Sorted z-values for every WM.